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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7850258 chr9:100549013 C/T EPDR1 chr7:37723446-37991543:+ -0.32 -7.08 5.18E-12 Box Plot
THCA rs7850258 chr9:100549013 C/T GGT5 chr22:24615622-24641110:- -0.26 -6 3.98E-9 Box Plot
THCA rs7850258 chr9:100549013 C/T NKX6-1 chr4:85413140-85419603:- -0.5 -8.49 2.62E-16 Box Plot
THCA rs78523677 chr5:176551103 C/A LOC388955 chr2:63849182-63850159:- -0.82 -21.4 9.68E-72 Box Plot
THCA rs78571503 chr7:140127204 G/A LOC441455 chr9:99488103-99489749:+ 0.53 6.71 5.58E-11 Box Plot
THCA rs78573204 chr3:96809412 A/G PRPF31 chr19:54618790-54635150:+ -0.37 -5.93 5.73E-9 Box Plot
THCA rs78580055 chr22:24046252 A/C IGLL3 chr22:25713888-25716191:+ 0.69 9.89 4.3E-21 Box Plot
THCA rs7864322 chr9:100548934 C/T BMPR1A chr10:88516358-88692595:+ -0.24 -6.19 1.33E-9 Box Plot
THCA rs7864322 chr9:100548934 C/T CLDN2 chrX:106143394-106174091:+ 0.26 6.07 2.56E-9 Box Plot
THCA rs7864322 chr9:100548934 C/T EML5 chr14:89078775-89259096:- 0.3 6.86 2.13E-11 Box Plot
THCA rs7864322 chr9:100548934 C/T EPDR1 chr7:37723446-37991543:+ 0.32 7.11 4.27E-12 Box Plot
THCA rs7864322 chr9:100548934 C/T GGT5 chr22:24615622-24641110:- 0.26 5.95 5.33E-9 Box Plot
THCA rs7864322 chr9:100548934 C/T LRRC42 chr1:54411750-54433841:+ -0.23 -6.06 2.78E-9 Box Plot
THCA rs7864322 chr9:100548934 C/T NKX6-1 chr4:85413140-85419603:- 0.5 8.81 2.25E-17 Box Plot
THCA rs7864322 chr9:100548934 C/T PLCE1 chr10:95790569-96092580:+ 0.27 6.15 1.64E-9 Box Plot